CDS

Accession Number TCMCG007C40877
gbkey CDS
Protein Id XP_009101960.1
Location complement(join(29145013..29145618,29145748..29146415,29146878..29147238,29147405..29147726,29147926..29148416,29148677..29148950,29149291..29149583,29149784..29150206,29150300..29150633,29150863..29152223))
Gene LOC103828114
GeneID 103828114
Organism Brassica rapa

Protein

Length 1710aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009103712.3
Definition brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description Guanine nucleotide exchange family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K18442        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005085        [VIEW IN EMBL-EBI]
GO:0005086        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006887        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007030        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010559        [VIEW IN EMBL-EBI]
GO:0010560        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0017022        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030837        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031333        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032272        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032878        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0034237        [VIEW IN EMBL-EBI]
GO:0034260        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051018        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051346        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0060049        [VIEW IN EMBL-EBI]
GO:0060050        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061041        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090283        [VIEW IN EMBL-EBI]
GO:0090284        [VIEW IN EMBL-EBI]
GO:0090303        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]
GO:1903018        [VIEW IN EMBL-EBI]
GO:1903020        [VIEW IN EMBL-EBI]
GO:1903034        [VIEW IN EMBL-EBI]
GO:1903036        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000114        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGTCGTCGCAGAACCTTGGTGGCGCCACCAGATGCGGCCGGGTCGTTGGCCCAACACTGGACAAAATCATCAAAAACGCCGCCTGGCGCAAGCATACATTCCTGGTTTCCGCCTGTAAATCTGTCCTCGACAAGCTCGAATCACTCTCCGATTCTCCCGATCCTTCATCGCCTCTCTTTGGTCTCTCCACCTCCGATTCGGATGCTGTCCTTGAGACTCTCCTTCTCTCCCTTGATACCGCATACACCAAGGTTGTTGAGCCTGCTCTCGATTGCTCTTTCAATCTCTTCTCCCTCTCCCTCCTCCGAGGCGAGGTATGCTCCTCGTCTCCCGACTCTCTTCTCTACAAGCTCATCCACGCGATCTGCAAGGTTTACAGCCTTGGCGAGGAGTCAGTTGAGCTAGCAGTCCTCCGCGTCCTCCTCGCTGCTGTCAGATCTCCTCTCATCATGATTCGAGGCGATTGTTTGCTCCATCTTGTGAGGACTTGCTACAACGTGTATCTCGGCGGATTCAATGGGACCAACCAGATCTGCGCTAAATCTGTACTAGCTCAGATTATGATCATCGTCTTCACCAGATCCGAGGCGAATTCTATGGATGTATCATCATTCAAAACGGTTAACGTCAACGACTTGCTTGCCATCACAGATAAAAATGTCAACGAAGGGAACTCTGTTCATATTTGCCAGGGATTCATTAACGACGTAGTTACGGCCGGAGAAGCTGCTCCTCCCCCGGATTTCAGATTAGTCATAGAACCAGGCGAGAATCCTGAGGATGGGGGCACAAGCAAGATCAGGGAAGACGGATTCCTTTTGTTCAAAAATCTATGTAAGTTGTCCATGAAGTTCTCGTCACAAGAGAACACCGACGATCAGATTCTTGTGAGGGGCAAGACTTTGTCTCTGGAGTTGCTCAAAGTTATAGTTGATAACGGTGGCCCAATTTGGCGCTCTGACGAAAGGCAAGTTTTATCTTTGATTCTACAAAGTCTGTGTTATATGAGCATCCTAGAGCTAACCCCCAAAATATGCAGGTTTCTAAATGCCATTAAGCAGTATCTTTGCTTGTCGCTGTTAAAGAATAGCGCACTCTCCGTAATGTCTATTTTTCAACTTCAATGTGCTATCTTCACCAGCTTACTACGGAAATATAGATCGGGCATGAAATCAGAAGTAGGCATATTCTTCCCCATGCTTGTCCTCCGAGTCCTTGAAAATGTTCTTCAGCCAAGTTTCTTGCAAAAAATGACTGTGCTCAGCCTACTTGACAACATTTGCCAAGACCCGTACCTAATCATTGACATTTTTGTCAACTTTGACTGTGATGTGGAGTCACCAAACATCTTCGAAAGGATAGTCAACGGTCTTCTGAAAACTGCTCTTGGGCCTCCTCCTGGTTCCTCGACCACTTTGACCGCTGTCCAGGATATTACGTTTAGGCACGAATCAGTGAAGTGCTTGGTTAGCATTATTAAGGCAATGGGAACATGGATGGACCAACAATTTAGCGTGGGAGAATCACTTTTGCCCAAGAGCGTAGAAAATGAAGCACTTGGAGACAATTATTCCAACCCAAATGAAGAAGACGGGACAACTGCAGATCATGACTTTCACCCAGATTTGAGTTCAGAGTCATCAGAGGCTGCAACTCTTGAACAGAGGAGGGCGTACAAAATTGAACTCCAGAAAGGCGTCGCTCTATTCAACAGAAAGCCTTCAAAGGGCATTGAGTTTCTTATAAGCTCTAAAAAGGTTGGCAGCTCCCCAGATGAGGTGGTGTCGTTCCTGAGGGATACCACAAGCTTGAATCCAACCATGATTGGAGATTATTTAGGTGAAAGAGAGGAGTTTCCAATGAAAGTTATGCATGCCTATGTGGACTCGTTTGATTTCAAGGAGATGAATTTTGGTGAGGCAATTAGGTTTTTCTTAAGGGGGTTCAGGCTTCCTGGAGAAGCACAGAAAATTGACCGCATAATGGAAAAGTTTGCTGAACGATTTTGCAAATGCAATCCAAATTCATTCAGCAGTGCGGACACAGCATATGTTCTTGCATACTCTGTGATAATGCTTAACACTGATGCCCATAATATTATGGTTAAAGAAAAGATGACCAAGGCTGATTTTATCAAAAATAACCGAGGCATTGATGATGGCAAAGATCTTCCAGAAGAGTACCTTGGTGCGCTTTATGACCAAGTTGTCAAAAATGAAATAAAGATGAGTTCTGATTCTTCTGCTCCAGAAAGCAGGCAGTCCAACGGCCTGAATAAACTACTGGGTCTAGACGGTATACTCAACCTGGTTTACTGGACACAAACAGAAGAAAAAGCGGTTGGGGCTAATGGTCTTCTTATAAAGCATATTCAAGAAAAGTTCAGGTCGAAGTCTGGAAAATCAGAATCAGCTTACCATGTCGTCACAGATGTCGCAATATTGCGTTTTATGGTTGATGTTTCCTGGGGACCAATGCTTGCCGCATTCAGTGTTACACTTGATCAGAATGATGACAGGCTTGCTGCAGTTGAATGCTTACGAGGCTTTCGGTATGCCGTTCATGTTACAGCAGTTATGGGTATGCAAACGCAAAGAGATGCATTTGTCACTTCCATGGCCAAGTTCACAAATCTCCATTGCGCAGGAGATATGAAGCAAAAGAATGTAGATGCTGTTAAAGCTATCATATCAATTGCCATTGAAGATGGTAACCACTTGCAAGATGCTTGGGAGCATATTTTGACTTGTCTTTCCAGAATTGAGCATTTGCAATTATTGGGTGAGGGAGCTCCAAGCGATGCATCTTATTTTGCATCATCCGAGACGGAGGAGAAGAAAGCCTTGGGTTTTCCTAATTTGAAGAAAAAAGGAGCCCTCCAGAATCCGGTAATGATGGCAGTTGTTCGAGGGGGTTCATACGACAGCAGTGCGATTGGACCAAATGTGTCGGCCCTTGTGAGGCAGGATCAAATCAATAACTTCATTGCAAACTTGAATTTGCTTGACCAGATCGGGAGTTTTCAGTTGAGTAATGTGTATGCTCATAGCCAGCGGTTGAAGACTGAAGCCATAGTAGCATTTGTCAAAGCTCTGTGCAAAGTCTCTATGTCAGAACTGCAGTCTCCTACAGATCCTCGAGTATTTAGCCTCACAAAATTAGTTGAGATCGCCCACTACAACATGAACCGCATCAGGCTAGTCTGGTCACGCATATGGAGCATCCTGTCAGATTTTTTTGTATCTGTAGGCTTATCAGAGAATCTTTCTGTTGCAATATTCGTTATGGACTCACTACGACAGCTTTCTATGAAGTTCTTGGAACGCGAGGAGCTAGCTAATTACAACTTCCAGAATGAATTTCTTCGACCGTTTGTCATTGTTATGCAGAAAAGCAGTTCTGCTGAAATTAGAGAACTAATAGTTCGGTGCATTTCTCAAATGGTACTCAGCCGTGTCAGTAATGTGAAATCAGGGTGGAAAAGTGTTTTCAAGGTTTTCACAACTGCAGCAGCTGATGAAAGAAAGAACATTGTGGTGTTGGCCTTCGAGACAATGGAAAAAATCGTCCGAGAGTATTTTTCATATATCACAGAGACGGAGGCAACAACTTTTACTGATTGTGTTAGATGTCTTATAACTTTCACTAACAGCAAGTTTACCAACGATGTTAGCCTGAATGCTATTGCGTTTCTACGATTTTGTGCACTAAAACTTGCAGACGGAGGCCTTGTGTGGAATGAGAAGAGTAGGTCTAGCAGTCCCAGTACTCCAGTAACAGATGACTGCGCACCAAATATCCAAAATTTTATGGAAGTAGATGAGAACATATCATATTGGGTTCCTTTGCTCACAGGATTGTCTAAGCTAACTTCTGATTCCAGATTAGCAATTCGTAAAAGCTCCTTGGAAGTGCTCTTTAATATTTTAAAGGATCATGGCCATCTCTTTTCACAAACGTTCTGGATCGGTGTTTTCAGTTCTGTTATTTATCCTATATTTAACAGTTTGTGGGGAGAGAAAGATCTACTTTCTAAAGATAAAGATGAACACAGTTCATTGCCATCCACATATGGTCCACATTCTAATGGGGTTTCTTGGGATTCTGAGACTTCAGCTATGGCGGCACAGTCTCTGGTGGACCTATTTGTCAGTTTTTTTACTGTGATTAGGTCTCAACTTTCTAGTGTGGTATCACTACTTGCTGGTCTTATAAGAAGTCCAGCTCAGGGTCCTACAGTAGCTGGAATCGGGGCGTTGCTGCGGTTGGCAGACGAATTGGGTGGGAGGTTCTCAGAAGACGAGTGGATGGAGATATTTTTGGCTGTGAAAGAAGCTGCTTCATTGATATTGTCTAGTTTCATGAAGATACTGAGAATCATAGATGACGTTCAAGATGAGGAAACATTGTCTGATCAGGACTTTAGTAATGAAGATAATGTGGACGAGGATAGCCTGCAAACTATGTCGTATGTTGTTTCAAGAACAAAGAGTCACATAACCGTCCAGTTACAAGTTATTCAGGTAGTGACCGATCTCTACCGAGTCCATCAGCAGTCACTGTTGGCATCTCATGTCGCAGTTATACTGGAGATACTCTCATCAATCACATCACACGCCCACCAGCTAAATTCTGATCTGATACTGCAGAAGAAAGTAAGGAGGGCATGCTCTATCCTGGAACTCTCTGAACCTCCCATGCTTCATTTCGAAAACGACACCCACCAGAACTACCTGGAGGTTCTTCAGGACATACTAACAGACAATCCAGGAGTGTCCGTGGAGCTAAGTATAGAGTCTCAACTGATTACAGTGTGTGTAAAAATTCTGAAGATGTACCTGAAATGCACAGTGTTTGAGGGTGCAGAGTTGGAAGAAACCAAGCAGCCCAAAAACTGGATTCTTCCCATGGGAGCGGCAGCGAAAGAAGAAGCAGCAGCGAGGTCTCCGCTAGTGGTTGCGGTGCTGAAGGCACTTAGGGGTCTGAAAGGAGATTCATTCAAGAGGTATGCACCAACTTTTTTCCAGTTGTTGGTGGAGCTTGTGCGGAGTGAGCACATCAACTCGCAAGTACCACAAGTGTTAAGCACCGTGTTCCATACGTGTATGGGTCCAATGATGGGTGAATAG
Protein:  
MSSSQNLGGATRCGRVVGPTLDKIIKNAAWRKHTFLVSACKSVLDKLESLSDSPDPSSPLFGLSTSDSDAVLETLLLSLDTAYTKVVEPALDCSFNLFSLSLLRGEVCSSSPDSLLYKLIHAICKVYSLGEESVELAVLRVLLAAVRSPLIMIRGDCLLHLVRTCYNVYLGGFNGTNQICAKSVLAQIMIIVFTRSEANSMDVSSFKTVNVNDLLAITDKNVNEGNSVHICQGFINDVVTAGEAAPPPDFRLVIEPGENPEDGGTSKIREDGFLLFKNLCKLSMKFSSQENTDDQILVRGKTLSLELLKVIVDNGGPIWRSDERQVLSLILQSLCYMSILELTPKICRFLNAIKQYLCLSLLKNSALSVMSIFQLQCAIFTSLLRKYRSGMKSEVGIFFPMLVLRVLENVLQPSFLQKMTVLSLLDNICQDPYLIIDIFVNFDCDVESPNIFERIVNGLLKTALGPPPGSSTTLTAVQDITFRHESVKCLVSIIKAMGTWMDQQFSVGESLLPKSVENEALGDNYSNPNEEDGTTADHDFHPDLSSESSEAATLEQRRAYKIELQKGVALFNRKPSKGIEFLISSKKVGSSPDEVVSFLRDTTSLNPTMIGDYLGEREEFPMKVMHAYVDSFDFKEMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERFCKCNPNSFSSADTAYVLAYSVIMLNTDAHNIMVKEKMTKADFIKNNRGIDDGKDLPEEYLGALYDQVVKNEIKMSSDSSAPESRQSNGLNKLLGLDGILNLVYWTQTEEKAVGANGLLIKHIQEKFRSKSGKSESAYHVVTDVAILRFMVDVSWGPMLAAFSVTLDQNDDRLAAVECLRGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAGDMKQKNVDAVKAIISIAIEDGNHLQDAWEHILTCLSRIEHLQLLGEGAPSDASYFASSETEEKKALGFPNLKKKGALQNPVMMAVVRGGSYDSSAIGPNVSALVRQDQINNFIANLNLLDQIGSFQLSNVYAHSQRLKTEAIVAFVKALCKVSMSELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRIWSILSDFFVSVGLSENLSVAIFVMDSLRQLSMKFLEREELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRCISQMVLSRVSNVKSGWKSVFKVFTTAAADERKNIVVLAFETMEKIVREYFSYITETEATTFTDCVRCLITFTNSKFTNDVSLNAIAFLRFCALKLADGGLVWNEKSRSSSPSTPVTDDCAPNIQNFMEVDENISYWVPLLTGLSKLTSDSRLAIRKSSLEVLFNILKDHGHLFSQTFWIGVFSSVIYPIFNSLWGEKDLLSKDKDEHSSLPSTYGPHSNGVSWDSETSAMAAQSLVDLFVSFFTVIRSQLSSVVSLLAGLIRSPAQGPTVAGIGALLRLADELGGRFSEDEWMEIFLAVKEAASLILSSFMKILRIIDDVQDEETLSDQDFSNEDNVDEDSLQTMSYVVSRTKSHITVQLQVIQVVTDLYRVHQQSLLASHVAVILEILSSITSHAHQLNSDLILQKKVRRACSILELSEPPMLHFENDTHQNYLEVLQDILTDNPGVSVELSIESQLITVCVKILKMYLKCTVFEGAELEETKQPKNWILPMGAAAKEEAAARSPLVVAVLKALRGLKGDSFKRYAPTFFQLLVELVRSEHINSQVPQVLSTVFHTCMGPMMGE